BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031F04LP1|AL429429
(902 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1759 1756 0.0
>3x_Contig1759
Length = 25622
Score = 1756 bits (883), Expect = 0.0
Identities = 897/903 (99%), Gaps = 1/903 (0%)
Strand = Plus / Minus
Query: 1 gatcgtatccttccacagtctgaattctcattttaaacttggcaaataacggatgctcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18258 gatcgtatccttccacagtctgaattctcattttaaacttggcaaataacggatgctcta 18199
Query: 61 ccttataagctgcaaaaagaactccttcatcttctaaaagttcggctctaatcaaattcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18198 ccttataagctgcaaaaagaactccttcatcttctaaaagttcggctctaatcaaattcc 18139
Query: 121 ctagagtgtggtcttctttctcaaacgttactataatagcactggatgccttggtatctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18138 ctagagtgtggtcttctttctcaaacgttactataatagcactggatgccttggtatctt 18079
Query: 181 gctctactttaagcttcgactcaccttccggtagtaaaaaaagttcaaatctatctggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18078 gctctactttaagcttcgactcaccttccggtagtaaaaaaagttcaaatctatctggag 18019
Query: 241 cattcatatcgttactctatattatctagcggasc-actgattgaatctgtcactggatt 299
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 18018 cattcatatcgttactctatattatctagcggagccactgattgaatctgtcactggatt 17959
Query: 300 gcgctgccttctcctgccaaacccacacaatgttgtctatggtcactttaaagttctgtt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17958 gcgctgccttctcctgccaaacccacacaatgttgtctatggtcactttaaagttctgtt 17899
Query: 360 gtgaatttttcatgttgagaagcgaactgcaatcagaatcagtgaatgaaaagtggttac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17898 gtgaatttttcatgttgagaagcgaactgcaatcagaatcagtgaatgaaaagtggttac 17839
Query: 420 cctcaggcacgtgatattgaatctgacccgaaatgtcgacagttcccaagaccaaaaaaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17838 cctcaggcacgtgatattgaatctgacccgaaatgtcgacagttcccaagaccaaaaaaa 17779
Query: 480 aaaaaaaaaaaaaaaaattcaaaatggaaagattcaaaaaaacatataaattgaaattta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17778 aaaaaaaaaaaaaaaaattcaaaatggaaagattcaaaaaaacatataaattgaaattta 17719
Query: 540 acatttgaactctttaaagtatgtttttagagtggaaattaaatgcggttgcagaatcta 599
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 17718 acatttgaactctttaaagtatgtatttagagtggaaattaaatgcggttgcagaatcta 17659
Query: 600 aaggggaacgagacaagacataaccttctctgtgcgatatcaagggcggataatcgagtr 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17658 aaggggaacgagacaagacataaccttctctgtgcgatatcaagggcggataatcgagta 17599
Query: 660 attgctttgagcttataccagtactttgagtwtctagttcatagtctaaggagtacacca 719
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 17598 attgctttgagcttataccagtactttgagtatctagttcatagtctaaggagtacacca 17539
Query: 720 ttgttcacgacgtgttttttggtcctgttcctttttttttattgttttctttatcaatca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17538 ttgttcacgacgtgttttttggtcctgttcctttttttttattgttttctttatcaatca 17479
Query: 780 tcgagatttgattctgattaaggaacttatctaactgctctgaggtacgaccacgattag 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17478 tcgagatttgattctgattaaggaacttatctaactgctctgaggtacgaccacgattag 17419
Query: 840 cgctgctatcatctattctttgatcgtgttatctaacgcatcgtattagtacaaaatttk 899
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17418 cgctgctatcatctattctttgatcgtgttatctaacgcatcgtattagtacaaaatttg 17359
Query: 900 gca 902
|||
Sbjct: 17358 gca 17356
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 26,251
Number of Sequences: 1807
Number of extensions: 26251
Number of successful extensions: 5533
Number of sequences better than 1.0e-20: 1
length of query: 902
length of database: 10,358,551
effective HSP length: 16
effective length of query: 886
effective length of database: 10,329,639
effective search space: 9152060154
effective search space used: 9152060154
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)